Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.43■□□□□ 0.7
SSRP1Q08945 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSRP1Q08945 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SSRP1Q08945 AC124067.4-201ENST00000519691 2379 ntBASIC19.42■□□□□ 0.7
SSRP1Q08945 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SSRP1Q08945 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 SLC25A1P1-201ENST00000528351 927 ntBASIC19.42■□□□□ 0.7
SSRP1Q08945 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SSRP1Q08945 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.42■□□□□ 0.7
SSRP1Q08945 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.42■□□□□ 0.7
SSRP1Q08945 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 AC064836.3-201ENST00000607928 673 ntBASIC19.42■□□□□ 0.7
SSRP1Q08945 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
SSRP1Q08945 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SSRP1Q08945 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSRP1Q08945 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSRP1Q08945 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 ZNF259P1-201ENST00000407656 1365 ntBASIC19.42■□□□□ 0.7
SSRP1Q08945 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.42■□□□□ 0.7
SSRP1Q08945 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SSRP1Q08945 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.41■□□□□ 0.7
SSRP1Q08945 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.41■□□□□ 0.7
SSRP1Q08945 AC007967.2-201ENST00000432613 625 ntBASIC19.41■□□□□ 0.7
SSRP1Q08945 RHOQP3-201ENST00000437982 621 ntBASIC19.41■□□□□ 0.7
SSRP1Q08945 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.41■□□□□ 0.7
SSRP1Q08945 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
SSRP1Q08945 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.41■□□□□ 0.7
SSRP1Q08945 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSRP1Q08945 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SSRP1Q08945 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSRP1Q08945 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.4■□□□□ 0.7
SSRP1Q08945 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.4■□□□□ 0.7
SSRP1Q08945 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.4■□□□□ 0.7
SSRP1Q08945 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.4■□□□□ 0.7
SSRP1Q08945 HMGA1P7-201ENST00000406908 502 ntBASIC19.4■□□□□ 0.7
SSRP1Q08945 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.4■□□□□ 0.7
SSRP1Q08945 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms