Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.98□□□□□ -0.01
EFNB1P98172 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
EFNB1P98172 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
EFNB1P98172 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
EFNB1P98172 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.98□□□□□ -0.01
EFNB1P98172 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.98□□□□□ -0.01
EFNB1P98172 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 RN7SL850P-201ENST00000579959 291 ntBASIC14.98□□□□□ -0.01
EFNB1P98172 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.98□□□□□ -0.01
EFNB1P98172 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.98□□□□□ -0.01
EFNB1P98172 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
EFNB1P98172 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
EFNB1P98172 AC131009.4-201ENST00000624048 1740 ntBASIC14.97□□□□□ -0.01
EFNB1P98172 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.97□□□□□ -0.01
EFNB1P98172 AC013268.4-201ENST00000637413 2228 ntBASIC14.97□□□□□ -0.01
EFNB1P98172 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 AC016027.1-202ENST00000607927 1699 ntBASIC14.97□□□□□ -0.01
EFNB1P98172 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
EFNB1P98172 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.97□□□□□ -0.01
EFNB1P98172 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.97□□□□□ -0.01
EFNB1P98172 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
EFNB1P98172 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.97□□□□□ -0.01
EFNB1P98172 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.97□□□□□ -0.01
EFNB1P98172 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.97□□□□□ -0.01
EFNB1P98172 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.97□□□□□ -0.01
EFNB1P98172 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.97□□□□□ -0.01
EFNB1P98172 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.97□□□□□ -0.01
EFNB1P98172 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.97□□□□□ -0.01
EFNB1P98172 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
EFNB1P98172 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 AC091167.2-201ENST00000579581 588 ntBASIC14.97□□□□□ -0.01
EFNB1P98172 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.97□□□□□ -0.01
EFNB1P98172 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 SLC22A20-204ENST00000530038 1673 ntBASIC14.97□□□□□ -0.01
EFNB1P98172 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EFNB1P98172 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
EFNB1P98172 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.96□□□□□ -0.01
EFNB1P98172 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
EFNB1P98172 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.96□□□□□ -0.01
EFNB1P98172 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.96□□□□□ -0.01
EFNB1P98172 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.96□□□□□ -0.01
EFNB1P98172 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.96□□□□□ -0.01
EFNB1P98172 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.96□□□□□ -0.01
EFNB1P98172 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.96□□□□□ -0.01
EFNB1P98172 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.96□□□□□ -0.01
EFNB1P98172 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EFNB1P98172 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.96□□□□□ -0.01
EFNB1P98172 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.96□□□□□ -0.01
EFNB1P98172 AC074051.2-201ENST00000565115 352 ntBASIC14.96□□□□□ -0.01
EFNB1P98172 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.96□□□□□ -0.01
EFNB1P98172 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms