Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
IRX3P78415 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 AC005034.1-201ENST00000426657 489 ntBASIC19.51■□□□□ 0.71
IRX3P78415 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 UGT1A2P-201ENST00000454886 866 ntBASIC19.51■□□□□ 0.71
IRX3P78415 AC069120.2-201ENST00000524091 540 ntBASIC19.51■□□□□ 0.71
IRX3P78415 ALG1L8P-201ENST00000533887 760 ntBASIC19.51■□□□□ 0.71
IRX3P78415 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.51■□□□□ 0.71
IRX3P78415 AC027307.2-201ENST00000591252 911 ntBASIC19.51■□□□□ 0.71
IRX3P78415 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 AL158211.3-201ENST00000607385 239 ntBASIC19.51■□□□□ 0.71
IRX3P78415 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
IRX3P78415 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
IRX3P78415 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.51■□□□□ 0.71
IRX3P78415 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX3P78415 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.5■□□□□ 0.71
IRX3P78415 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 TOP3BP1-201ENST00000420768 1380 ntBASIC19.5■□□□□ 0.71
IRX3P78415 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.5■□□□□ 0.71
IRX3P78415 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.5■□□□□ 0.71
IRX3P78415 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.5■□□□□ 0.71
IRX3P78415 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 AP000842.3-202ENST00000569238 1080 ntBASIC19.5■□□□□ 0.71
IRX3P78415 AL035252.4-201ENST00000624174 288 ntBASIC19.5■□□□□ 0.71
IRX3P78415 AP001350.2-201ENST00000625104 1094 ntBASIC19.5■□□□□ 0.71
IRX3P78415 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
IRX3P78415 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 NOC2LP2-201ENST00000407594 1944 ntBASIC19.5■□□□□ 0.71
IRX3P78415 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
IRX3P78415 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX3P78415 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.5■□□□□ 0.71
IRX3P78415 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
IRX3P78415 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 EGFEM1P-202ENST00000431685 1563 ntBASIC19.49■□□□□ 0.71
IRX3P78415 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.49■□□□□ 0.71
IRX3P78415 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
IRX3P78415 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
IRX3P78415 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 MIR661-201ENST00000384842 89 ntBASIC19.49■□□□□ 0.71
IRX3P78415 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.49■□□□□ 0.71
IRX3P78415 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 FAM207CP-201ENST00000443486 507 ntBASIC19.49■□□□□ 0.71
IRX3P78415 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.49■□□□□ 0.71
IRX3P78415 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.49■□□□□ 0.71
IRX3P78415 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.49■□□□□ 0.71
IRX3P78415 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.49■□□□□ 0.71
IRX3P78415 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.49■□□□□ 0.71
IRX3P78415 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
IRX3P78415 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IRX3P78415 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX3P78415 SLC22A20-204ENST00000530038 1673 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms