Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CXCR4P61073 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.33■□□□□ 0.04
CXCR4P61073 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.33■□□□□ 0.04
CXCR4P61073 AL353593.2-201ENST00000602529 1483 ntBASIC15.33■□□□□ 0.04
CXCR4P61073 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CXCR4P61073 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CXCR4P61073 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CXCR4P61073 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CXCR4P61073 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CXCR4P61073 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 AK4P3-201ENST00000418260 669 ntBASIC15.32■□□□□ 0.04
CXCR4P61073 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 AC092647.4-201ENST00000457211 535 ntBASIC15.32■□□□□ 0.04
CXCR4P61073 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CXCR4P61073 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.32■□□□□ 0.04
CXCR4P61073 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CXCR4P61073 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.32■□□□□ 0.04
CXCR4P61073 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.32■□□□□ 0.04
CXCR4P61073 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.32■□□□□ 0.04
CXCR4P61073 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.32■□□□□ 0.04
CXCR4P61073 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 AC125634.1-201ENST00000438758 1403 ntBASIC15.32■□□□□ 0.04
CXCR4P61073 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CXCR4P61073 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.32■□□□□ 0.04
CXCR4P61073 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.32■□□□□ 0.04
CXCR4P61073 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CXCR4P61073 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 TNRC18P2-201ENST00000417666 2714 ntBASIC15.31■□□□□ 0.04
CXCR4P61073 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.31■□□□□ 0.04
CXCR4P61073 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CXCR4P61073 KRT18P57-201ENST00000443599 1254 ntBASIC15.31■□□□□ 0.04
CXCR4P61073 STK19B-204ENST00000512515 211 ntBASIC15.31■□□□□ 0.04
CXCR4P61073 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.31■□□□□ 0.04
CXCR4P61073 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.31■□□□□ 0.04
CXCR4P61073 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.31■□□□□ 0.04
CXCR4P61073 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.31■□□□□ 0.04
CXCR4P61073 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCR4P61073 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCR4P61073 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CXCR4P61073 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CXCR4P61073 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.3■□□□□ 0.04
CXCR4P61073 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CXCR4P61073 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CXCR4P61073 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.3■□□□□ 0.04
CXCR4P61073 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.3■□□□□ 0.04
CXCR4P61073 SPDYE13P-201ENST00000445314 798 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms