Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.64■□□□□ 0.73
RHBDL3P58872 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 TERF1P3-201ENST00000505638 1227 ntBASIC19.64■□□□□ 0.73
RHBDL3P58872 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.64■□□□□ 0.73
RHBDL3P58872 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.64■□□□□ 0.73
RHBDL3P58872 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RHBDL3P58872 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 AL035456.1-201ENST00000456064 1369 ntBASIC19.64■□□□□ 0.73
RHBDL3P58872 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.64■□□□□ 0.73
RHBDL3P58872 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.64■□□□□ 0.73
RHBDL3P58872 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RHBDL3P58872 GPAA1P2-202ENST00000606848 1787 ntBASIC19.64■□□□□ 0.73
RHBDL3P58872 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RHBDL3P58872 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RHBDL3P58872 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.64■□□□□ 0.73
RHBDL3P58872 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDL3P58872 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDL3P58872 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RHBDL3P58872 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDL3P58872 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDL3P58872 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDL3P58872 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.63■□□□□ 0.73
RHBDL3P58872 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDL3P58872 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDL3P58872 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDL3P58872 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.63■□□□□ 0.73
RHBDL3P58872 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.63■□□□□ 0.73
RHBDL3P58872 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.63■□□□□ 0.73
RHBDL3P58872 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.63■□□□□ 0.73
RHBDL3P58872 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDL3P58872 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.63■□□□□ 0.73
RHBDL3P58872 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.63■□□□□ 0.73
RHBDL3P58872 AC105021.1-202ENST00000570572 669 ntBASIC19.63■□□□□ 0.73
RHBDL3P58872 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
RHBDL3P58872 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDL3P58872 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.63■□□□□ 0.73
RHBDL3P58872 RN7SL828P-201ENST00000607615 303 ntBASIC19.63■□□□□ 0.73
RHBDL3P58872 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDL3P58872 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RHBDL3P58872 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDL3P58872 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDL3P58872 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 RPL37AP1-201ENST00000412502 279 ntBASIC19.62■□□□□ 0.73
RHBDL3P58872 AC015922.1-201ENST00000421102 1152 ntBASIC19.62■□□□□ 0.73
RHBDL3P58872 AL353705.2-201ENST00000428243 662 ntBASIC19.62■□□□□ 0.73
RHBDL3P58872 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.62■□□□□ 0.73
RHBDL3P58872 SERBP1P5-201ENST00000510079 1181 ntBASIC19.62■□□□□ 0.73
RHBDL3P58872 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.62■□□□□ 0.73
RHBDL3P58872 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.62■□□□□ 0.73
RHBDL3P58872 TEX28P1-201ENST00000613479 1221 ntBASIC19.62■□□□□ 0.73
RHBDL3P58872 TEX28P2-201ENST00000617764 1221 ntBASIC19.62■□□□□ 0.73
RHBDL3P58872 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.62■□□□□ 0.73
RHBDL3P58872 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RHBDL3P58872 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RHBDL3P58872 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.62■□□□□ 0.73
RHBDL3P58872 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.62■□□□□ 0.73
RHBDL3P58872 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.62■□□□□ 0.73
RHBDL3P58872 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms