Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK4P57078 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK4P57078 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.89■■□□□ 1.09
RIPK4P57078 WASH6P-202ENST00000359512 1437 ntBASIC21.89■■□□□ 1.09
RIPK4P57078 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK4P57078 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
RIPK4P57078 AC016027.1-202ENST00000607927 1699 ntBASIC21.88■■□□□ 1.09
RIPK4P57078 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.88■■□□□ 1.09
RIPK4P57078 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 UBALD1-205ENST00000590891 2641 ntBASIC21.88■■□□□ 1.09
RIPK4P57078 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.88■■□□□ 1.09
RIPK4P57078 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.88■■□□□ 1.09
RIPK4P57078 TIMM8BP1-201ENST00000452384 211 ntBASIC21.88■■□□□ 1.09
RIPK4P57078 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.88■■□□□ 1.09
RIPK4P57078 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.88■■□□□ 1.09
RIPK4P57078 FAM86C2P-203ENST00000528684 1004 ntBASIC21.88■■□□□ 1.09
RIPK4P57078 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RIPK4P57078 AC022145.2-201ENST00000598203 171 ntBASIC21.88■■□□□ 1.09
RIPK4P57078 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.88■■□□□ 1.09
RIPK4P57078 AL513210.1-201ENST00000629608 234 ntBASIC21.88■■□□□ 1.09
RIPK4P57078 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.88■■□□□ 1.09
RIPK4P57078 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RIPK4P57078 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.88■■□□□ 1.09
RIPK4P57078 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.88■■□□□ 1.09
RIPK4P57078 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 FLJ38576-201ENST00000623820 2459 ntBASIC21.88■■□□□ 1.09
RIPK4P57078 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK4P57078 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RIPK4P57078 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 AKAP8P1-201ENST00000434743 1349 ntBASIC21.87■■□□□ 1.09
RIPK4P57078 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.87■■□□□ 1.09
RIPK4P57078 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.87■■□□□ 1.09
RIPK4P57078 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
RIPK4P57078 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 AC004461.1-201ENST00000412461 403 ntBASIC21.87■■□□□ 1.09
RIPK4P57078 AGGF1P2-201ENST00000426656 2106 ntBASIC21.87■■□□□ 1.09
RIPK4P57078 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.87■■□□□ 1.09
RIPK4P57078 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.87■■□□□ 1.09
RIPK4P57078 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RIPK4P57078 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.87■■□□□ 1.09
RIPK4P57078 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK4P57078 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.87■■□□□ 1.09
RIPK4P57078 AC006538.1-201ENST00000567905 1585 ntBASIC21.87■■□□□ 1.09
RIPK4P57078 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
RIPK4P57078 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK4P57078 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK4P57078 CNN2P11-201ENST00000429351 262 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 SPDYE11-202ENST00000450699 704 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK4P57078 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK4P57078 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.86■■□□□ 1.09
RIPK4P57078 SNHG9-202ENST00000564014 471 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 SPDYE9P-201ENST00000570642 692 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 SPDYE10P-202ENST00000612005 668 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 SPDYE8P-202ENST00000612377 668 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RIPK4P57078 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.86■■□□□ 1.09
RIPK4P57078 AC079781.4-201ENST00000641908 219 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RIPK4P57078 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK4P57078 AC011676.5-201ENST00000624864 2660 ntBASIC21.86■■□□□ 1.09
RIPK4P57078 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms