Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.16■□□□□ 0.02
SUMO3P55854 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SUMO3P55854 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.16■□□□□ 0.02
SUMO3P55854 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.16■□□□□ 0.02
SUMO3P55854 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.16■□□□□ 0.02
SUMO3P55854 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SUMO3P55854 AC002347.1-201ENST00000569543 541 ntBASIC15.16■□□□□ 0.02
SUMO3P55854 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.16■□□□□ 0.02
SUMO3P55854 AL031731.1-201ENST00000642131 2094 ntBASIC15.16■□□□□ 0.02
SUMO3P55854 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.16■□□□□ 0.02
SUMO3P55854 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.16■□□□□ 0.02
SUMO3P55854 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SUMO3P55854 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SUMO3P55854 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.15■□□□□ 0.02
SUMO3P55854 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SUMO3P55854 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.15■□□□□ 0.02
SUMO3P55854 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.15■□□□□ 0.02
SUMO3P55854 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.15■□□□□ 0.02
SUMO3P55854 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.15■□□□□ 0.02
SUMO3P55854 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 GPAA1P2-202ENST00000606848 1787 ntBASIC15.15■□□□□ 0.02
SUMO3P55854 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.15■□□□□ 0.02
SUMO3P55854 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.15■□□□□ 0.02
SUMO3P55854 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
SUMO3P55854 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SUMO3P55854 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 GGT4P-201ENST00000623672 1708 ntBASIC15.14■□□□□ 0.01
SUMO3P55854 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.14■□□□□ 0.01
SUMO3P55854 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.14■□□□□ 0.01
SUMO3P55854 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 AC002056.1-201ENST00000395613 760 ntBASIC15.14■□□□□ 0.01
SUMO3P55854 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.14■□□□□ 0.01
SUMO3P55854 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 AC112191.1-201ENST00000523689 701 ntBASIC15.14■□□□□ 0.01
SUMO3P55854 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.14■□□□□ 0.01
SUMO3P55854 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.14■□□□□ 0.01
SUMO3P55854 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SUMO3P55854 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms