Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR661-201ENST00000384842 89 ntBASIC17.97■□□□□ 0.47
VCPP55072 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.97■□□□□ 0.47
VCPP55072 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.97■□□□□ 0.47
VCPP55072 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCPP55072 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.97■□□□□ 0.47
VCPP55072 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.97■□□□□ 0.47
VCPP55072 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.97■□□□□ 0.47
VCPP55072 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCPP55072 AC092902.6-201ENST00000641783 218 ntBASIC17.97■□□□□ 0.47
VCPP55072 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCPP55072 AC092053.1-201ENST00000605787 1936 ntBASIC17.97■□□□□ 0.47
VCPP55072 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCPP55072 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCPP55072 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.97■□□□□ 0.47
VCPP55072 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.97■□□□□ 0.47
VCPP55072 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCPP55072 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
VCPP55072 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 AC105020.1-201ENST00000435356 2205 ntBASIC17.96■□□□□ 0.47
VCPP55072 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
VCPP55072 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.96■□□□□ 0.47
VCPP55072 AC005915.1-201ENST00000624912 2018 ntBASIC17.96■□□□□ 0.47
VCPP55072 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.96■□□□□ 0.47
VCPP55072 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.96■□□□□ 0.47
VCPP55072 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.96■□□□□ 0.47
VCPP55072 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VCPP55072 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.96■□□□□ 0.47
VCPP55072 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 AC074386.1-202ENST00000463561 864 ntBASIC17.96■□□□□ 0.47
VCPP55072 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.96■□□□□ 0.47
VCPP55072 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.96■□□□□ 0.47
VCPP55072 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.96■□□□□ 0.47
VCPP55072 RN7SL204P-201ENST00000582831 262 ntBASIC17.96■□□□□ 0.47
VCPP55072 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.96■□□□□ 0.47
VCPP55072 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.96■□□□□ 0.47
VCPP55072 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.96■□□□□ 0.47
VCPP55072 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCPP55072 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VCPP55072 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VCPP55072 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VCPP55072 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VCPP55072 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
VCPP55072 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.96■□□□□ 0.46
VCPP55072 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
VCPP55072 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
VCPP55072 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VCPP55072 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 AL118508.1-201ENST00000613502 2345 ntBASIC17.95■□□□□ 0.46
VCPP55072 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
VCPP55072 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
VCPP55072 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
VCPP55072 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCPP55072 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.95■□□□□ 0.46
VCPP55072 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VCPP55072 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
VCPP55072 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.95■□□□□ 0.46
VCPP55072 AC096734.2-201ENST00000562054 433 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms