Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 Z83836.1-201ENST00000624605 1642 ntBASIC15.97■□□□□ 0.15
NR1H2P55055 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NR1H2P55055 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NR1H2P55055 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.97■□□□□ 0.15
NR1H2P55055 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NR1H2P55055 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.97■□□□□ 0.15
NR1H2P55055 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NR1H2P55055 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H2P55055 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.97■□□□□ 0.15
NR1H2P55055 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.97■□□□□ 0.15
NR1H2P55055 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
NR1H2P55055 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.97■□□□□ 0.15
NR1H2P55055 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H2P55055 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.97■□□□□ 0.15
NR1H2P55055 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NR1H2P55055 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.97■□□□□ 0.15
NR1H2P55055 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NR1H2P55055 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H2P55055 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NR1H2P55055 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.96■□□□□ 0.15
NR1H2P55055 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 AC246785.2-201ENST00000432512 513 ntBASIC15.96■□□□□ 0.15
NR1H2P55055 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 AC005332.3-201ENST00000589904 676 ntBASIC15.96■□□□□ 0.15
NR1H2P55055 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.96■□□□□ 0.15
NR1H2P55055 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 LINC01711-201ENST00000598340 967 ntBASIC15.96■□□□□ 0.15
NR1H2P55055 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.96■□□□□ 0.15
NR1H2P55055 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.96■□□□□ 0.15
NR1H2P55055 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H2P55055 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.96■□□□□ 0.15
NR1H2P55055 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H2P55055 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
NR1H2P55055 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H2P55055 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H2P55055 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H2P55055 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H2P55055 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H2P55055 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H2P55055 TNRC18P2-201ENST00000417666 2714 ntBASIC15.96■□□□□ 0.14
NR1H2P55055 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.95■□□□□ 0.14
NR1H2P55055 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.95■□□□□ 0.14
NR1H2P55055 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 AC004870.1-201ENST00000315132 882 ntBASIC15.95■□□□□ 0.14
NR1H2P55055 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms