Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HMGA2P52926 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMGA2P52926 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 LINC00265-3P-201ENST00000447588 903 ntBASIC15.31■□□□□ 0.04
HMGA2P52926 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.31■□□□□ 0.04
HMGA2P52926 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HMGA2P52926 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 AC091167.2-201ENST00000579581 588 ntBASIC15.31■□□□□ 0.04
HMGA2P52926 MIR3180-1-201ENST00000580374 94 ntBASIC15.31■□□□□ 0.04
HMGA2P52926 MIR3180-3-201ENST00000584616 94 ntBASIC15.31■□□□□ 0.04
HMGA2P52926 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGA2P52926 AC010654.1-201ENST00000615722 808 ntBASIC15.31■□□□□ 0.04
HMGA2P52926 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
HMGA2P52926 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
HMGA2P52926 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGA2P52926 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGA2P52926 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
HMGA2P52926 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGA2P52926 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMGA2P52926 PCGF3-213ENST00000620529 1899 ntBASIC15.31■□□□□ 0.04
HMGA2P52926 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGA2P52926 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGA2P52926 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGA2P52926 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HMGA2P52926 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HMGA2P52926 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.3■□□□□ 0.04
HMGA2P52926 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGA2P52926 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGA2P52926 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HMGA2P52926 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HMGA2P52926 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 AC012615.1-201ENST00000565797 1299 ntBASIC15.3■□□□□ 0.04
HMGA2P52926 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 AL139424.1-201ENST00000607572 797 ntBASIC15.3■□□□□ 0.04
HMGA2P52926 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 AL589182.2-201ENST00000619332 1049 ntBASIC15.3■□□□□ 0.04
HMGA2P52926 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.3■□□□□ 0.04
HMGA2P52926 AC131009.4-201ENST00000624048 1740 ntBASIC15.3■□□□□ 0.04
HMGA2P52926 AC022532.1-201ENST00000624563 1728 ntBASIC15.3■□□□□ 0.04
HMGA2P52926 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGA2P52926 AL022326.1-202ENST00000641533 845 ntBASIC15.3■□□□□ 0.04
HMGA2P52926 AF228730.7-201ENST00000641842 219 ntBASIC15.3■□□□□ 0.04
HMGA2P52926 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HMGA2P52926 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGA2P52926 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HMGA2P52926 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGA2P52926 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGA2P52926 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGA2P52926 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGA2P52926 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 CDC14C-201ENST00000428251 1719 ntBASIC15.29■□□□□ 0.04
HMGA2P52926 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGA2P52926 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGA2P52926 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGA2P52926 AC104819.1-201ENST00000504587 486 ntBASIC15.29■□□□□ 0.04
HMGA2P52926 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HMGA2P52926 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HMGA2P52926 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HMGA2P52926 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGA2P52926 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGA2P52926 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HMGA2P52926 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGA2P52926 REXO1L8P-201ENST00000604378 1897 ntBASIC15.29■□□□□ 0.04
HMGA2P52926 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms