Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 AC006277.1-201ENST00000624348 1610 ntBASIC14.81□□□□□ -0.04
CCR9P51686 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCR9P51686 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCR9P51686 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 IGHV3-47-201ENST00000425060 335 ntBASIC14.81□□□□□ -0.04
CCR9P51686 TSSC2-201ENST00000450217 709 ntBASIC14.81□□□□□ -0.04
CCR9P51686 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 AC096582.2-201ENST00000510860 516 ntBASIC14.81□□□□□ -0.04
CCR9P51686 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.81□□□□□ -0.04
CCR9P51686 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCR9P51686 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.81□□□□□ -0.04
CCR9P51686 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 AC005332.1-201ENST00000577698 1310 ntBASIC14.81□□□□□ -0.04
CCR9P51686 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCR9P51686 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.81□□□□□ -0.04
CCR9P51686 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCR9P51686 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.81□□□□□ -0.04
CCR9P51686 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.8□□□□□ -0.04
CCR9P51686 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.8□□□□□ -0.04
CCR9P51686 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.8□□□□□ -0.04
CCR9P51686 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.8□□□□□ -0.04
CCR9P51686 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.8□□□□□ -0.04
CCR9P51686 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 TPSP2-201ENST00000561760 610 ntBASIC14.8□□□□□ -0.04
CCR9P51686 RN7SL850P-201ENST00000579959 291 ntBASIC14.8□□□□□ -0.04
CCR9P51686 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.8□□□□□ -0.04
CCR9P51686 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.8□□□□□ -0.04
CCR9P51686 TERC-201ENST00000602385 541 ntBASIC14.8□□□□□ -0.04
CCR9P51686 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCR9P51686 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.8□□□□□ -0.04
CCR9P51686 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.8□□□□□ -0.04
CCR9P51686 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.8□□□□□ -0.04
CCR9P51686 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.8□□□□□ -0.04
CCR9P51686 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.8□□□□□ -0.04
CCR9P51686 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.8□□□□□ -0.04
CCR9P51686 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CCR9P51686 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
CCR9P51686 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CCR9P51686 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CCR9P51686 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCR9P51686 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms