Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.51□□□□□ -0.09
HCFC1P51610 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.51□□□□□ -0.09
HCFC1P51610 AC132938.2-201ENST00000579188 680 ntBASIC14.51□□□□□ -0.09
HCFC1P51610 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.51□□□□□ -0.09
HCFC1P51610 AC008738.7-201ENST00000609744 511 ntBASIC14.51□□□□□ -0.09
HCFC1P51610 AC004790.1-201ENST00000612686 536 ntBASIC14.51□□□□□ -0.09
HCFC1P51610 AL591163.1-201ENST00000641757 987 ntBASIC14.51□□□□□ -0.09
HCFC1P51610 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.51□□□□□ -0.09
HCFC1P51610 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.51□□□□□ -0.09
HCFC1P51610 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
HCFC1P51610 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.51□□□□□ -0.09
HCFC1P51610 SPTLC1P1-201ENST00000447199 261 ntBASIC14.51□□□□□ -0.09
HCFC1P51610 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.51□□□□□ -0.09
HCFC1P51610 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.51□□□□□ -0.09
HCFC1P51610 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.51□□□□□ -0.09
HCFC1P51610 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HCFC1P51610 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HCFC1P51610 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.5□□□□□ -0.09
HCFC1P51610 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.5□□□□□ -0.09
HCFC1P51610 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.5□□□□□ -0.09
HCFC1P51610 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.5□□□□□ -0.09
HCFC1P51610 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.5□□□□□ -0.09
HCFC1P51610 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.5□□□□□ -0.09
HCFC1P51610 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.5□□□□□ -0.09
HCFC1P51610 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.5□□□□□ -0.09
HCFC1P51610 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HCFC1P51610 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.5□□□□□ -0.09
HCFC1P51610 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HCFC1P51610 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
HCFC1P51610 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.5□□□□□ -0.09
HCFC1P51610 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HCFC1P51610 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HCFC1P51610 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HCFC1P51610 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.49□□□□□ -0.09
HCFC1P51610 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HCFC1P51610 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.49□□□□□ -0.09
HCFC1P51610 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.49□□□□□ -0.09
HCFC1P51610 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HCFC1P51610 AC016396.2-201ENST00000562575 1417 ntBASIC14.49□□□□□ -0.09
HCFC1P51610 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms