Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
SMARCA4P51532 AL139010.1-201ENST00000454878 894 ntBASIC29.42■■■□□ 2.3
SMARCA4P51532 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC29.42■■■□□ 2.3
SMARCA4P51532 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCA4P51532 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC29.42■■■□□ 2.3
SMARCA4P51532 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCA4P51532 MIR6869-201ENST00000619434 62 ntBASIC29.42■■■□□ 2.3
SMARCA4P51532 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCA4P51532 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCA4P51532 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC29.42■■■□□ 2.3
SMARCA4P51532 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 GPAA1P2-202ENST00000606848 1787 ntBASIC29.42■■■□□ 2.3
SMARCA4P51532 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC29.42■■■□□ 2.3
SMARCA4P51532 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCA4P51532 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SMARCA4P51532 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SMARCA4P51532 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SMARCA4P51532 AC092933.1-201ENST00000393644 945 ntBASIC29.42■■■□□ 2.3
SMARCA4P51532 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC29.42■■■□□ 2.3
SMARCA4P51532 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC29.42■■■□□ 2.3
SMARCA4P51532 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC29.42■■■□□ 2.3
SMARCA4P51532 CTBP2P5-201ENST00000454986 1264 ntBASIC29.42■■■□□ 2.3
SMARCA4P51532 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
SMARCA4P51532 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCA4P51532 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC29.42■■■□□ 2.3
SMARCA4P51532 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC29.41■■■□□ 2.3
SMARCA4P51532 Z97205.2-201ENST00000564697 1639 ntBASIC29.41■■■□□ 2.3
SMARCA4P51532 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
SMARCA4P51532 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC29.41■■■□□ 2.3
SMARCA4P51532 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC29.41■■■□□ 2.3
SMARCA4P51532 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 STX1A-203ENST00000395155 783 ntTSL 2 BASIC29.41■■■□□ 2.3
SMARCA4P51532 AL442647.2-201ENST00000429864 857 ntBASIC29.41■■■□□ 2.3
SMARCA4P51532 AL162726.2-201ENST00000438986 1017 ntBASIC29.41■■■□□ 2.3
SMARCA4P51532 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC29.41■■■□□ 2.3
SMARCA4P51532 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC29.41■■■□□ 2.3
SMARCA4P51532 IGHV3OR16-16-201ENST00000563644 343 ntBASIC29.41■■■□□ 2.3
SMARCA4P51532 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SMARCA4P51532 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 AL031731.1-201ENST00000642131 2094 ntBASIC29.4■■■□□ 2.3
SMARCA4P51532 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC29.4■■■□□ 2.3
SMARCA4P51532 PXK-206ENST00000463280 2825 ntTSL 2 BASIC29.4■■■□□ 2.3
SMARCA4P51532 CD276-201ENST00000318424 2738 ntTSL 5 BASIC29.4■■■□□ 2.3
SMARCA4P51532 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 AC020765.3-201ENST00000613051 740 ntBASIC29.4■■■□□ 2.3
SMARCA4P51532 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC29.4■■■□□ 2.3
SMARCA4P51532 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
SMARCA4P51532 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC29.4■■■□□ 2.3
SMARCA4P51532 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 AL136982.4-201ENST00000437689 1740 ntBASIC29.4■■■□□ 2.3
SMARCA4P51532 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCA4P51532 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC29.39■■■□□ 2.3
SMARCA4P51532 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC29.39■■■□□ 2.3
SMARCA4P51532 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCA4P51532 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
SMARCA4P51532 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
SMARCA4P51532 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
SMARCA4P51532 AC093525.8-201ENST00000624099 1342 ntBASIC29.39■■■□□ 2.3
SMARCA4P51532 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCA4P51532 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC29.39■■■□□ 2.3
SMARCA4P51532 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCA4P51532 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC29.39■■■□□ 2.3
SMARCA4P51532 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
SMARCA4P51532 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
SMARCA4P51532 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCA4P51532 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
SMARCA4P51532 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SMARCA4P51532 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC29.39■■■□□ 2.29
SMARCA4P51532 RELA-227ENST00000615805 2236 ntTSL 5 BASIC29.39■■■□□ 2.29
SMARCA4P51532 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
SMARCA4P51532 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC29.39■■■□□ 2.29
SMARCA4P51532 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC29.38■■■□□ 2.29
SMARCA4P51532 USB1-202ENST00000423271 1217 ntTSL 2 BASIC29.38■■■□□ 2.29
SMARCA4P51532 KRT43P-201ENST00000434019 910 ntBASIC29.38■■■□□ 2.29
SMARCA4P51532 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC29.38■■■□□ 2.29
SMARCA4P51532 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC29.38■■■□□ 2.29
SMARCA4P51532 PFAS-212ENST00000625942 396 ntTSL 5 BASIC29.38■■■□□ 2.29
SMARCA4P51532 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC29.38■■■□□ 2.29
SMARCA4P51532 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
SMARCA4P51532 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms