Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL15A1P39059 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COL15A1P39059 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.05■□□□□ 0.96
COL15A1P39059 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
COL15A1P39059 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.04■□□□□ 0.96
COL15A1P39059 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.04■□□□□ 0.96
COL15A1P39059 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.04■□□□□ 0.96
COL15A1P39059 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.04■□□□□ 0.96
COL15A1P39059 API5-211ENST00000534695 560 ntTSL 5 BASIC21.04■□□□□ 0.96
COL15A1P39059 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.04■□□□□ 0.96
COL15A1P39059 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
COL15A1P39059 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.04■□□□□ 0.96
COL15A1P39059 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.04■□□□□ 0.96
COL15A1P39059 AL133215.2-201ENST00000609242 977 ntBASIC21.04■□□□□ 0.96
COL15A1P39059 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.04■□□□□ 0.96
COL15A1P39059 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL15A1P39059 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.04■□□□□ 0.96
COL15A1P39059 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.03■□□□□ 0.96
COL15A1P39059 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.03■□□□□ 0.96
COL15A1P39059 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.03■□□□□ 0.96
COL15A1P39059 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
COL15A1P39059 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.03■□□□□ 0.96
COL15A1P39059 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.03■□□□□ 0.96
COL15A1P39059 AC105021.1-202ENST00000570572 669 ntBASIC21.03■□□□□ 0.96
COL15A1P39059 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.03■□□□□ 0.96
COL15A1P39059 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.03■□□□□ 0.96
COL15A1P39059 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.03■□□□□ 0.96
COL15A1P39059 AL359881.2-201ENST00000602973 570 ntBASIC21.03■□□□□ 0.96
COL15A1P39059 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.03■□□□□ 0.96
COL15A1P39059 AC004790.1-201ENST00000612686 536 ntBASIC21.03■□□□□ 0.96
COL15A1P39059 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.03■□□□□ 0.96
COL15A1P39059 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
COL15A1P39059 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL15A1P39059 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.03■□□□□ 0.96
COL15A1P39059 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL15A1P39059 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.02■□□□□ 0.96
COL15A1P39059 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.02■□□□□ 0.96
COL15A1P39059 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL15A1P39059 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.02■□□□□ 0.96
COL15A1P39059 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.02■□□□□ 0.96
COL15A1P39059 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
COL15A1P39059 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.02■□□□□ 0.96
COL15A1P39059 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL15A1P39059 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.02■□□□□ 0.96
COL15A1P39059 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL15A1P39059 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL15A1P39059 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL15A1P39059 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
COL15A1P39059 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
COL15A1P39059 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COL15A1P39059 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 RNA5SP410-201ENST00000516285 106 ntBASIC21.01■□□□□ 0.95
COL15A1P39059 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
COL15A1P39059 AC104794.3-201ENST00000566840 1248 ntBASIC21.01■□□□□ 0.95
COL15A1P39059 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.01■□□□□ 0.95
COL15A1P39059 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.01■□□□□ 0.95
COL15A1P39059 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL15A1P39059 AL671710.1-201ENST00000610245 2349 ntBASIC21.01■□□□□ 0.95
COL15A1P39059 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms