Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDE6BP35913 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.45■□□□□ 0.86
PDE6BP35913 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
PDE6BP35913 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE6BP35913 MYCLP2-201ENST00000449268 967 ntBASIC20.45■□□□□ 0.86
PDE6BP35913 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.45■□□□□ 0.86
PDE6BP35913 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDE6BP35913 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE6BP35913 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 AC024267.1-201ENST00000582320 895 ntBASIC20.45■□□□□ 0.86
PDE6BP35913 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 AC013467.2-201ENST00000605472 835 ntBASIC20.45■□□□□ 0.86
PDE6BP35913 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.45■□□□□ 0.86
PDE6BP35913 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.45■□□□□ 0.86
PDE6BP35913 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.45■□□□□ 0.86
PDE6BP35913 AL033527.5-202ENST00000641632 1098 ntBASIC20.45■□□□□ 0.86
PDE6BP35913 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.45■□□□□ 0.86
PDE6BP35913 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDE6BP35913 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6BP35913 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.44■□□□□ 0.86
PDE6BP35913 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PDE6BP35913 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.44■□□□□ 0.86
PDE6BP35913 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 SDHAP3-202ENST00000515467 728 ntBASIC20.44■□□□□ 0.86
PDE6BP35913 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.44■□□□□ 0.86
PDE6BP35913 TPRX2P-201ENST00000535362 881 ntBASIC20.44■□□□□ 0.86
PDE6BP35913 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PDE6BP35913 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.44■□□□□ 0.86
PDE6BP35913 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 AC099568.2-201ENST00000609194 695 ntBASIC20.44■□□□□ 0.86
PDE6BP35913 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE6BP35913 AC006277.1-201ENST00000624348 1610 ntBASIC20.44■□□□□ 0.86
PDE6BP35913 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 AL671710.1-201ENST00000610245 2349 ntBASIC20.44■□□□□ 0.86
PDE6BP35913 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 KRT8P12-202ENST00000472924 1397 ntBASIC20.44■□□□□ 0.86
PDE6BP35913 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.44■□□□□ 0.86
PDE6BP35913 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.44■□□□□ 0.86
PDE6BP35913 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE6BP35913 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE6BP35913 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE6BP35913 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.43■□□□□ 0.86
PDE6BP35913 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE6BP35913 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.43■□□□□ 0.86
PDE6BP35913 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE6BP35913 AL354751.1-201ENST00000412768 1863 ntBASIC20.43■□□□□ 0.86
PDE6BP35913 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE6BP35913 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDE6BP35913 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.42■□□□□ 0.86
PDE6BP35913 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDE6BP35913 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.42■□□□□ 0.86
PDE6BP35913 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDE6BP35913 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.42■□□□□ 0.86
PDE6BP35913 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.86
PDE6BP35913 AL512343.1-201ENST00000605837 169 ntBASIC20.42■□□□□ 0.86
PDE6BP35913 AC026979.3-201ENST00000607315 403 ntBASIC20.42■□□□□ 0.86
PDE6BP35913 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.42■□□□□ 0.86
PDE6BP35913 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.42■□□□□ 0.86
PDE6BP35913 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms