Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 NKAPP1-205ENST00000585790 367 ntBASIC16.02■□□□□ 0.16
KRT20P35900 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 AC092171.3-201ENST00000610122 2651 ntBASIC16.02■□□□□ 0.16
KRT20P35900 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT20P35900 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
KRT20P35900 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT20P35900 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
KRT20P35900 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.02■□□□□ 0.15
KRT20P35900 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
KRT20P35900 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT20P35900 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.02■□□□□ 0.15
KRT20P35900 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT20P35900 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT20P35900 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT20P35900 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT20P35900 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT20P35900 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT20P35900 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 AC079328.2-201ENST00000561241 3354 ntBASIC16.01■□□□□ 0.15
KRT20P35900 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 AC097637.2-201ENST00000624096 1997 ntBASIC16.01■□□□□ 0.15
KRT20P35900 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT20P35900 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT20P35900 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT20P35900 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 AL135999.2-201ENST00000622438 1686 ntBASIC16.01■□□□□ 0.15
KRT20P35900 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT20P35900 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 AC148477.5-201ENST00000625164 1645 ntBASIC16.01■□□□□ 0.15
KRT20P35900 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT20P35900 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
KRT20P35900 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16■□□□□ 0.15
KRT20P35900 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16■□□□□ 0.15
KRT20P35900 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16■□□□□ 0.15
KRT20P35900 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16■□□□□ 0.15
KRT20P35900 AC078925.2-201ENST00000624013 1973 ntBASIC16■□□□□ 0.15
KRT20P35900 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT20P35900 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
KRT20P35900 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT20P35900 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16■□□□□ 0.15
KRT20P35900 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16■□□□□ 0.15
KRT20P35900 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16■□□□□ 0.15
KRT20P35900 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
KRT20P35900 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16■□□□□ 0.15
KRT20P35900 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
KRT20P35900 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 PRYP5-201ENST00000451909 266 ntBASIC16■□□□□ 0.15
KRT20P35900 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT20P35900 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16■□□□□ 0.15
KRT20P35900 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16■□□□□ 0.15
KRT20P35900 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16■□□□□ 0.15
KRT20P35900 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 AL121912.1-201ENST00000603683 238 ntBASIC16■□□□□ 0.15
KRT20P35900 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms