Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT9P35527 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT9P35527 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KRT9P35527 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
KRT9P35527 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT9P35527 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 AP002414.1-201ENST00000391405 1147 ntBASIC18.39■□□□□ 0.53
KRT9P35527 RBM17P3-201ENST00000417687 1192 ntBASIC18.39■□□□□ 0.53
KRT9P35527 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT9P35527 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT9P35527 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT9P35527 AC073592.4-201ENST00000623827 446 ntBASIC18.39■□□□□ 0.53
KRT9P35527 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT9P35527 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT9P35527 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT9P35527 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT9P35527 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT9P35527 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT9P35527 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT9P35527 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KRT9P35527 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT9P35527 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT9P35527 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT9P35527 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KRT9P35527 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.38■□□□□ 0.53
KRT9P35527 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT9P35527 KRT18P56-201ENST00000507275 550 ntBASIC18.38■□□□□ 0.53
KRT9P35527 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT9P35527 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT9P35527 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 MTDHP3-201ENST00000594186 672 ntBASIC18.38■□□□□ 0.53
KRT9P35527 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT9P35527 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
KRT9P35527 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT9P35527 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT9P35527 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT9P35527 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT9P35527 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KRT9P35527 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT9P35527 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT9P35527 CLEC4GP1-201ENST00000596555 870 ntBASIC18.37■□□□□ 0.53
KRT9P35527 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT9P35527 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KRT9P35527 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT9P35527 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT9P35527 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 MTHFR-217ENST00000641820 1569 ntBASIC18.37■□□□□ 0.53
KRT9P35527 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT9P35527 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT9P35527 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms