Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC1P35251 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC1P35251 AC098831.1-202ENST00000438821 336 ntBASIC17.69■□□□□ 0.42
RFC1P35251 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC1P35251 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC1P35251 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC1P35251 AL662844.1-201ENST00000546340 181 ntBASIC17.69■□□□□ 0.42
RFC1P35251 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC1P35251 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC1P35251 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.69■□□□□ 0.42
RFC1P35251 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
RFC1P35251 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC1P35251 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.69■□□□□ 0.42
RFC1P35251 SNX33P1-201ENST00000592116 1762 ntBASIC17.68■□□□□ 0.42
RFC1P35251 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RFC1P35251 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RFC1P35251 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.68■□□□□ 0.42
RFC1P35251 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RFC1P35251 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 PMS2P1-201ENST00000431037 1228 ntBASIC17.68■□□□□ 0.42
RFC1P35251 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.68■□□□□ 0.42
RFC1P35251 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC1P35251 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC1P35251 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.68■□□□□ 0.42
RFC1P35251 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RFC1P35251 AL121894.2-201ENST00000602977 491 ntBASIC17.68■□□□□ 0.42
RFC1P35251 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.68■□□□□ 0.42
RFC1P35251 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC1P35251 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 PCDHB19P-201ENST00000570871 2371 ntBASIC17.68■□□□□ 0.42
RFC1P35251 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC1P35251 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
RFC1P35251 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 AC129492.6-201ENST00000611383 1305 ntBASIC17.68■□□□□ 0.42
RFC1P35251 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFC1P35251 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC1P35251 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC1P35251 AL671710.1-201ENST00000610245 2349 ntBASIC17.67■□□□□ 0.42
RFC1P35251 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC1P35251 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RFC1P35251 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC1P35251 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 MRPL20P1-201ENST00000400819 433 ntBASIC17.67■□□□□ 0.42
RFC1P35251 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RFC1P35251 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC1P35251 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.67■□□□□ 0.42
RFC1P35251 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RFC1P35251 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RFC1P35251 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC1P35251 AC131009.4-201ENST00000624048 1740 ntBASIC17.67■□□□□ 0.42
RFC1P35251 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RFC1P35251 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC1P35251 AC006538.1-201ENST00000567905 1585 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms