Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN7P35236 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN7P35236 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN7P35236 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PTPN7P35236 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN7P35236 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN7P35236 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN7P35236 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN7P35236 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN7P35236 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN7P35236 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPN7P35236 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN7P35236 GPAA1P2-202ENST00000606848 1787 ntBASIC17.33■□□□□ 0.36
PTPN7P35236 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN7P35236 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN7P35236 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN7P35236 POU5F1P6-201ENST00000466990 990 ntBASIC17.32■□□□□ 0.36
PTPN7P35236 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN7P35236 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN7P35236 OR7E14P-202ENST00000530490 1290 ntBASIC17.32■□□□□ 0.36
PTPN7P35236 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.32■□□□□ 0.36
PTPN7P35236 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN7P35236 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN7P35236 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTPN7P35236 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 PCDHA1-201ENST00000378133 2726 ntBASIC17.32■□□□□ 0.36
PTPN7P35236 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN7P35236 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN7P35236 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN7P35236 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN7P35236 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN7P35236 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PTPN7P35236 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 LINC01144-201ENST00000626198 1710 ntBASIC17.31■□□□□ 0.36
PTPN7P35236 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN7P35236 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 IGHV3-65-201ENST00000523210 341 ntBASIC17.31■□□□□ 0.36
PTPN7P35236 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN7P35236 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN7P35236 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN7P35236 IFNL4P1-201ENST00000607083 540 ntBASIC17.31■□□□□ 0.36
PTPN7P35236 AP001350.2-201ENST00000625104 1094 ntBASIC17.31■□□□□ 0.36
PTPN7P35236 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN7P35236 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms