Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC6A4P31645 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A4P31645 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A4P31645 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC6A4P31645 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC6A4P31645 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A4P31645 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC6A4P31645 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SLC6A4P31645 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC6A4P31645 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A4P31645 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A4P31645 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC6A4P31645 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.15■□□□□ 0.34
SLC6A4P31645 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
SLC6A4P31645 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A4P31645 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A4P31645 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SLC6A4P31645 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC6A4P31645 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A4P31645 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A4P31645 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC6A4P31645 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A4P31645 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC6A4P31645 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC6A4P31645 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SLC6A4P31645 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC6A4P31645 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
SLC6A4P31645 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC6A4P31645 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLC6A4P31645 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC6A4P31645 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 PMS2P2-201ENST00000425039 1128 ntBASIC17.14■□□□□ 0.33
SLC6A4P31645 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 AC023141.5-201ENST00000458585 616 ntBASIC17.14■□□□□ 0.33
SLC6A4P31645 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A4P31645 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A4P31645 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A4P31645 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A4P31645 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A4P31645 AL138918.1-201ENST00000568306 659 ntBASIC17.14■□□□□ 0.33
SLC6A4P31645 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A4P31645 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A4P31645 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC6A4P31645 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLC6A4P31645 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC6A4P31645 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC6A4P31645 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC6A4P31645 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A4P31645 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A4P31645 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A4P31645 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A4P31645 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A4P31645 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms