Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL6A2P12110 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 AL365203.3-201ENST00000609742 2057 ntBASIC16.6■□□□□ 0.25
COL6A2P12110 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.6■□□□□ 0.25
COL6A2P12110 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 AL512652.2-201ENST00000625156 1716 ntBASIC16.6■□□□□ 0.25
COL6A2P12110 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COL6A2P12110 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.6■□□□□ 0.25
COL6A2P12110 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.6■□□□□ 0.25
COL6A2P12110 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.6■□□□□ 0.25
COL6A2P12110 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 AC091167.2-201ENST00000579581 588 ntBASIC16.6■□□□□ 0.25
COL6A2P12110 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.6■□□□□ 0.25
COL6A2P12110 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 AL358472.4-201ENST00000633140 710 ntBASIC16.6■□□□□ 0.25
COL6A2P12110 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.6■□□□□ 0.25
COL6A2P12110 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL6A2P12110 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL6A2P12110 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL6A2P12110 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL6A2P12110 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.6■□□□□ 0.25
COL6A2P12110 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 AC007950.2-201ENST00000615045 2347 ntBASIC16.59■□□□□ 0.25
COL6A2P12110 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.59■□□□□ 0.25
COL6A2P12110 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.59■□□□□ 0.25
COL6A2P12110 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
COL6A2P12110 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.59■□□□□ 0.25
COL6A2P12110 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.59■□□□□ 0.25
COL6A2P12110 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.59■□□□□ 0.25
COL6A2P12110 AC139887.3-201ENST00000568585 713 ntBASIC16.59■□□□□ 0.25
COL6A2P12110 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.59■□□□□ 0.25
COL6A2P12110 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.59■□□□□ 0.25
COL6A2P12110 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.59■□□□□ 0.25
COL6A2P12110 AC138894.3-201ENST00000603787 634 ntBASIC16.59■□□□□ 0.25
COL6A2P12110 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.59■□□□□ 0.25
COL6A2P12110 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COL6A2P12110 REXO1L3P-201ENST00000622202 1288 ntBASIC16.59■□□□□ 0.25
COL6A2P12110 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COL6A2P12110 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
COL6A2P12110 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL6A2P12110 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL6A2P12110 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
COL6A2P12110 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL6A2P12110 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL6A2P12110 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.58■□□□□ 0.25
COL6A2P12110 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.58■□□□□ 0.25
COL6A2P12110 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL6A2P12110 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.58■□□□□ 0.25
COL6A2P12110 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.58■□□□□ 0.25
COL6A2P12110 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms