Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
TOP2AP11388 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
TOP2AP11388 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
TOP2AP11388 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC28.82■■■□□ 2.2
TOP2AP11388 MIR4259-201ENST00000584466 101 ntBASIC28.82■■■□□ 2.2
TOP2AP11388 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC28.82■■■□□ 2.2
TOP2AP11388 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
TOP2AP11388 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TOP2AP11388 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
TOP2AP11388 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TOP2AP11388 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TOP2AP11388 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TOP2AP11388 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC28.82■■■□□ 2.2
TOP2AP11388 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC28.82■■■□□ 2.2
TOP2AP11388 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC28.82■■■□□ 2.2
TOP2AP11388 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 AL645728.1-201ENST00000366221 2101 ntBASIC28.81■■■□□ 2.2
TOP2AP11388 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 AL391256.1-201ENST00000443260 1855 ntBASIC28.81■■■□□ 2.2
TOP2AP11388 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
TOP2AP11388 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 CYP4F24P-201ENST00000586049 1580 ntBASIC28.81■■■□□ 2.2
TOP2AP11388 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC28.81■■■□□ 2.2
TOP2AP11388 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC28.81■■■□□ 2.2
TOP2AP11388 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC28.81■■■□□ 2.2
TOP2AP11388 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC28.81■■■□□ 2.2
TOP2AP11388 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
TOP2AP11388 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC28.81■■■□□ 2.2
TOP2AP11388 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
TOP2AP11388 NOC2LP2-201ENST00000407594 1944 ntBASIC28.81■■■□□ 2.2
TOP2AP11388 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC28.8■■■□□ 2.2
TOP2AP11388 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC28.8■■■□□ 2.2
TOP2AP11388 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TOP2AP11388 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
TOP2AP11388 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
TOP2AP11388 NAA38-206ENST00000576384 424 ntTSL 2 BASIC28.8■■■□□ 2.2
TOP2AP11388 AL512343.1-201ENST00000605837 169 ntBASIC28.8■■■□□ 2.2
TOP2AP11388 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
TOP2AP11388 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TOP2AP11388 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
TOP2AP11388 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
TOP2AP11388 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
TOP2AP11388 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 PP12613-201ENST00000424958 2230 ntBASIC28.8■■■□□ 2.2
TOP2AP11388 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
TOP2AP11388 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC28.8■■■□□ 2.2
TOP2AP11388 CD276-203ENST00000537340 2439 ntTSL 2 BASIC28.8■■■□□ 2.2
TOP2AP11388 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TOP2AP11388 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
TOP2AP11388 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC28.79■■■□□ 2.2
TOP2AP11388 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC28.79■■■□□ 2.2
TOP2AP11388 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TOP2AP11388 MEP1AP4-201ENST00000423244 1087 ntBASIC28.79■■■□□ 2.2
TOP2AP11388 GALT-202ENST00000450095 1280 ntTSL 2 BASIC28.79■■■□□ 2.2
TOP2AP11388 AC007389.4-201ENST00000454674 793 ntBASIC28.79■■■□□ 2.2
TOP2AP11388 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC28.79■■■□□ 2.2
TOP2AP11388 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
TOP2AP11388 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
TOP2AP11388 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
TOP2AP11388 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
TOP2AP11388 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TOP2AP11388 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TOP2AP11388 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC28.79■■■□□ 2.2
TOP2AP11388 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC28.79■■■□□ 2.2
TOP2AP11388 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
TOP2AP11388 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC28.79■■■□□ 2.2
TOP2AP11388 HIST1H2BPS3-201ENST00000419683 341 ntBASIC28.79■■■□□ 2.2
TOP2AP11388 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC28.79■■■□□ 2.2
TOP2AP11388 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TOP2AP11388 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
TOP2AP11388 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TOP2AP11388 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC28.78■■■□□ 2.2
TOP2AP11388 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
TOP2AP11388 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC28.78■■■□□ 2.2
TOP2AP11388 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC28.78■■■□□ 2.2
TOP2AP11388 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
TOP2AP11388 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
TOP2AP11388 AMT-206ENST00000458307 1860 ntTSL 2 BASIC28.78■■■□□ 2.2
TOP2AP11388 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC28.78■■■□□ 2.2
TOP2AP11388 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
TOP2AP11388 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TOP2AP11388 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
TOP2AP11388 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC28.78■■■□□ 2.2
TOP2AP11388 AL139010.1-201ENST00000454878 894 ntBASIC28.78■■■□□ 2.2
TOP2AP11388 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC28.78■■■□□ 2.2
TOP2AP11388 MIR6069-201ENST00000620069 79 ntBASIC28.78■■■□□ 2.2
TOP2AP11388 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms