Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.77□□□□□ -0.05
UBCP0CG48 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 PCED1CP-201ENST00000419887 785 ntBASIC14.77□□□□□ -0.05
UBCP0CG48 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.77□□□□□ -0.05
UBCP0CG48 AC012615.1-201ENST00000565797 1299 ntBASIC14.77□□□□□ -0.05
UBCP0CG48 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.77□□□□□ -0.05
UBCP0CG48 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.77□□□□□ -0.05
UBCP0CG48 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
UBCP0CG48 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
UBCP0CG48 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.77□□□□□ -0.05
UBCP0CG48 AC079328.2-201ENST00000561241 3354 ntBASIC14.77□□□□□ -0.05
UBCP0CG48 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UBCP0CG48 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBCP0CG48 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.76□□□□□ -0.05
UBCP0CG48 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
UBCP0CG48 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 AC013467.2-201ENST00000605472 835 ntBASIC14.76□□□□□ -0.05
UBCP0CG48 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.76□□□□□ -0.05
UBCP0CG48 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.76□□□□□ -0.05
UBCP0CG48 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 AL662844.4-201ENST00000606367 2838 ntBASIC14.76□□□□□ -0.05
UBCP0CG48 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
UBCP0CG48 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBCP0CG48 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.75□□□□□ -0.05
UBCP0CG48 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.75□□□□□ -0.05
UBCP0CG48 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
UBCP0CG48 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
UBCP0CG48 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UBCP0CG48 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.75□□□□□ -0.05
UBCP0CG48 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBCP0CG48 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms