Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.14□□□□□ -0.15
CD74P04233 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 NUS1P1-201ENST00000446295 882 ntBASIC14.13□□□□□ -0.15
CD74P04233 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 TSPY15P-201ENST00000457163 923 ntBASIC14.13□□□□□ -0.15
CD74P04233 RN7SL606P-201ENST00000472779 293 ntBASIC14.13□□□□□ -0.15
CD74P04233 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CD74P04233 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CD74P04233 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD74P04233 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 LINC02447-202ENST00000501888 2146 ntBASIC14.12□□□□□ -0.15
CD74P04233 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD74P04233 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
CD74P04233 SNX33P1-201ENST00000592116 1762 ntBASIC14.12□□□□□ -0.15
CD74P04233 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CD74P04233 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 AL671710.1-201ENST00000610245 2349 ntBASIC14.12□□□□□ -0.15
CD74P04233 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CD74P04233 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.12□□□□□ -0.15
CD74P04233 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.12□□□□□ -0.15
CD74P04233 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.12□□□□□ -0.15
CD74P04233 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.12□□□□□ -0.15
CD74P04233 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CD74P04233 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.12□□□□□ -0.15
CD74P04233 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.12□□□□□ -0.15
CD74P04233 AC073592.5-201ENST00000624854 528 ntBASIC14.12□□□□□ -0.15
CD74P04233 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.12□□□□□ -0.15
CD74P04233 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CD74P04233 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.12□□□□□ -0.15
CD74P04233 TNRC18P2-201ENST00000417666 2714 ntBASIC14.12□□□□□ -0.15
CD74P04233 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD74P04233 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CD74P04233 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD74P04233 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CD74P04233 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
CD74P04233 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD74P04233 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.11□□□□□ -0.15
CD74P04233 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CD74P04233 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms