Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPNE6O95741 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPNE6O95741 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE6O95741 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPNE6O95741 LINC00304-203ENST00000565008 1864 ntBASIC16.48■□□□□ 0.23
CPNE6O95741 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CPNE6O95741 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE6O95741 AC103702.1-201ENST00000548801 2630 ntBASIC16.48■□□□□ 0.23
CPNE6O95741 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 AC112191.1-201ENST00000523689 701 ntBASIC16.48■□□□□ 0.23
CPNE6O95741 RFPL4AP1-201ENST00000530883 850 ntBASIC16.48■□□□□ 0.23
CPNE6O95741 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CPNE6O95741 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE6O95741 AC092902.6-201ENST00000641783 218 ntBASIC16.48■□□□□ 0.23
CPNE6O95741 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE6O95741 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE6O95741 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE6O95741 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CPNE6O95741 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CPNE6O95741 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE6O95741 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CPNE6O95741 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CPNE6O95741 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CPNE6O95741 AL645939.2-201ENST00000427340 991 ntBASIC16.47■□□□□ 0.23
CPNE6O95741 SLC25A6P2-201ENST00000497974 877 ntBASIC16.47■□□□□ 0.23
CPNE6O95741 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.47■□□□□ 0.23
CPNE6O95741 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.47■□□□□ 0.23
CPNE6O95741 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.47■□□□□ 0.23
CPNE6O95741 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE6O95741 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 REXO1L3P-201ENST00000622202 1288 ntBASIC16.47■□□□□ 0.23
CPNE6O95741 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE6O95741 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CPNE6O95741 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CPNE6O95741 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE6O95741 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CPNE6O95741 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
CPNE6O95741 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE6O95741 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE6O95741 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE6O95741 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE6O95741 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE6O95741 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 CYMP-203ENST00000474680 1263 ntBASIC16.46■□□□□ 0.23
CPNE6O95741 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE6O95741 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE6O95741 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms