Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 KRT8P49-201ENST00000604166 1432 ntBASIC14.92□□□□□ -0.02
CNOT4O95628 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT4O95628 METTL21AP1-201ENST00000438852 635 ntBASIC14.92□□□□□ -0.02
CNOT4O95628 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
CNOT4O95628 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT4O95628 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 AL031432.2-201ENST00000566714 459 ntBASIC14.92□□□□□ -0.02
CNOT4O95628 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 AC005829.1-201ENST00000570002 483 ntBASIC14.92□□□□□ -0.02
CNOT4O95628 AL928711.1-201ENST00000570165 459 ntBASIC14.92□□□□□ -0.02
CNOT4O95628 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT4O95628 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT4O95628 MIR4515-201ENST00000584082 81 ntBASIC14.92□□□□□ -0.02
CNOT4O95628 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT4O95628 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT4O95628 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT4O95628 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT4O95628 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CNOT4O95628 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 MKNK2P1-201ENST00000437526 628 ntBASIC14.91□□□□□ -0.02
CNOT4O95628 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.91□□□□□ -0.02
CNOT4O95628 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT4O95628 AC074386.1-202ENST00000463561 864 ntBASIC14.91□□□□□ -0.02
CNOT4O95628 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.91□□□□□ -0.02
CNOT4O95628 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.91□□□□□ -0.02
CNOT4O95628 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 DUX4L17-201ENST00000557360 1267 ntBASIC14.91□□□□□ -0.02
CNOT4O95628 AC018845.2-201ENST00000568326 409 ntBASIC14.91□□□□□ -0.02
CNOT4O95628 AP001350.2-201ENST00000625104 1094 ntBASIC14.91□□□□□ -0.02
CNOT4O95628 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT4O95628 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT4O95628 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CNOT4O95628 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT4O95628 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT4O95628 AL645608.8-201ENST00000606034 2086 ntBASIC14.91□□□□□ -0.02
CNOT4O95628 AC025580.3-201ENST00000617932 1424 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms