Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CBX6O95503 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CBX6O95503 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX6O95503 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.78■□□□□ 0.28
CBX6O95503 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX6O95503 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.78■□□□□ 0.28
CBX6O95503 AC005332.3-201ENST00000589904 676 ntBASIC16.78■□□□□ 0.28
CBX6O95503 AC138894.3-201ENST00000603787 634 ntBASIC16.78■□□□□ 0.28
CBX6O95503 IGHV3-41-201ENST00000613121 348 ntBASIC16.78■□□□□ 0.28
CBX6O95503 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.78■□□□□ 0.28
CBX6O95503 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CBX6O95503 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CBX6O95503 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CBX6O95503 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX6O95503 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX6O95503 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CBX6O95503 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX6O95503 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.77■□□□□ 0.28
CBX6O95503 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.77■□□□□ 0.28
CBX6O95503 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.77■□□□□ 0.28
CBX6O95503 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.77■□□□□ 0.28
CBX6O95503 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CBX6O95503 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CBX6O95503 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CBX6O95503 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.77■□□□□ 0.28
CBX6O95503 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.77■□□□□ 0.28
CBX6O95503 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
CBX6O95503 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CBX6O95503 AL671883.3-201ENST00000603274 991 ntBASIC16.77■□□□□ 0.28
CBX6O95503 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 AC117500.6-201ENST00000624871 588 ntBASIC16.77■□□□□ 0.28
CBX6O95503 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX6O95503 AP002414.2-201ENST00000591780 3365 ntBASIC16.77■□□□□ 0.28
CBX6O95503 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.77■□□□□ 0.28
CBX6O95503 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.77■□□□□ 0.28
CBX6O95503 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CBX6O95503 AL391256.1-201ENST00000443260 1855 ntBASIC16.77■□□□□ 0.27
CBX6O95503 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CBX6O95503 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.77■□□□□ 0.27
CBX6O95503 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CBX6O95503 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CBX6O95503 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.77■□□□□ 0.27
CBX6O95503 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.77■□□□□ 0.27
CBX6O95503 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CBX6O95503 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CBX6O95503 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CBX6O95503 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX6O95503 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX6O95503 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX6O95503 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.76■□□□□ 0.27
CBX6O95503 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.76■□□□□ 0.27
CBX6O95503 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX6O95503 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX6O95503 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX6O95503 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX6O95503 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms