Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC24.7■■□□□ 1.54
RAPGEF3O95398 RN7SL399P-201ENST00000471648 279 ntBASIC24.7■■□□□ 1.54
RAPGEF3O95398 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF3O95398 TDH-203ENST00000531764 1110 ntBASIC24.7■■□□□ 1.54
RAPGEF3O95398 TIMM17BP1-201ENST00000545713 516 ntBASIC24.7■■□□□ 1.54
RAPGEF3O95398 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC24.7■■□□□ 1.54
RAPGEF3O95398 AC024267.1-201ENST00000582320 895 ntBASIC24.7■■□□□ 1.54
RAPGEF3O95398 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC24.7■■□□□ 1.54
RAPGEF3O95398 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC24.7■■□□□ 1.54
RAPGEF3O95398 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF3O95398 AC006538.1-201ENST00000567905 1585 ntBASIC24.7■■□□□ 1.54
RAPGEF3O95398 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF3O95398 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF3O95398 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC24.7■■□□□ 1.54
RAPGEF3O95398 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC24.7■■□□□ 1.54
RAPGEF3O95398 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF3O95398 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAPGEF3O95398 KRT8P22-201ENST00000562317 1415 ntBASIC24.69■■□□□ 1.54
RAPGEF3O95398 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 AL021578.1-201ENST00000613646 709 ntBASIC24.69■■□□□ 1.54
RAPGEF3O95398 CU634019.7-201ENST00000624153 1185 ntBASIC24.69■■□□□ 1.54
RAPGEF3O95398 FP236241.2-201ENST00000624906 1185 ntBASIC24.69■■□□□ 1.54
RAPGEF3O95398 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 SNX33P1-201ENST00000592116 1762 ntBASIC24.69■■□□□ 1.54
RAPGEF3O95398 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAPGEF3O95398 PXK-206ENST00000463280 2825 ntTSL 2 BASIC24.69■■□□□ 1.54
RAPGEF3O95398 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC24.68■■□□□ 1.54
RAPGEF3O95398 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC24.68■■□□□ 1.54
RAPGEF3O95398 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC24.68■■□□□ 1.54
RAPGEF3O95398 AP000812.2-201ENST00000538934 718 ntBASIC24.68■■□□□ 1.54
RAPGEF3O95398 AC009542.2-202ENST00000619004 1067 ntBASIC24.68■■□□□ 1.54
RAPGEF3O95398 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 DEK-201ENST00000244776 1441 ntTSL 2 BASIC24.68■■□□□ 1.54
RAPGEF3O95398 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAPGEF3O95398 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 RPL13AP20-201ENST00000459725 609 ntBASIC24.67■■□□□ 1.54
RAPGEF3O95398 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 SUOX-214ENST00000551841 906 ntTSL 3 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 DERL2-202ENST00000570848 657 ntTSL 5 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 RPS15-212ENST00000593052 629 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAPGEF3O95398 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC24.67■■□□□ 1.54
RAPGEF3O95398 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF3O95398 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF3O95398 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF3O95398 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF3O95398 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF3O95398 AGER-203ENST00000375065 665 ntTSL 2 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 GZMB-202ENST00000382540 816 ntTSL 5 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 HIST3H2BA-201ENST00000436555 524 ntBASIC24.66■■□□□ 1.54
RAPGEF3O95398 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAPGEF3O95398 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC24.66■■□□□ 1.54
RAPGEF3O95398 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms