Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SPDYE22P-201ENST00000582158 798 ntBASIC19.48■□□□□ 0.71
CTNND1O60716 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.48■□□□□ 0.71
CTNND1O60716 AC013467.2-201ENST00000605472 835 ntBASIC19.48■□□□□ 0.71
CTNND1O60716 AL358472.5-202ENST00000641448 1267 ntBASIC19.48■□□□□ 0.71
CTNND1O60716 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.48■□□□□ 0.71
CTNND1O60716 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.48■□□□□ 0.71
CTNND1O60716 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 AC006277.1-201ENST00000624348 1610 ntBASIC19.47■□□□□ 0.71
CTNND1O60716 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 AC073439.1-201ENST00000624121 1774 ntBASIC19.47■□□□□ 0.71
CTNND1O60716 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CTNND1O60716 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CTNND1O60716 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.47■□□□□ 0.71
CTNND1O60716 AL353705.2-201ENST00000428243 662 ntBASIC19.47■□□□□ 0.71
CTNND1O60716 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.47■□□□□ 0.71
CTNND1O60716 AL662799.1-202ENST00000614205 422 ntBASIC19.47■□□□□ 0.71
CTNND1O60716 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CTNND1O60716 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.47■□□□□ 0.71
CTNND1O60716 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CTNND1O60716 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.47■□□□□ 0.71
CTNND1O60716 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.47■□□□□ 0.71
CTNND1O60716 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.47■□□□□ 0.71
CTNND1O60716 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTNND1O60716 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.46■□□□□ 0.71
CTNND1O60716 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNND1O60716 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CTNND1O60716 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.46■□□□□ 0.71
CTNND1O60716 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 CR383656.12-201ENST00000549567 513 ntBASIC19.46■□□□□ 0.71
CTNND1O60716 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNND1O60716 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.46■□□□□ 0.71
CTNND1O60716 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
CTNND1O60716 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.46■□□□□ 0.71
CTNND1O60716 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CTNND1O60716 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNND1O60716 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.46■□□□□ 0.71
CTNND1O60716 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNND1O60716 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CTNND1O60716 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.45■□□□□ 0.7
CTNND1O60716 AC067852.2-201ENST00000590513 2313 ntBASIC19.45■□□□□ 0.7
CTNND1O60716 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.45■□□□□ 0.7
CTNND1O60716 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.45■□□□□ 0.7
CTNND1O60716 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 SPTLC1P1-201ENST00000447199 261 ntBASIC19.45■□□□□ 0.7
CTNND1O60716 AC009477.1-201ENST00000452936 217 ntBASIC19.45■□□□□ 0.7
CTNND1O60716 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 AC098859.1-201ENST00000502915 1238 ntBASIC19.45■□□□□ 0.7
CTNND1O60716 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.45■□□□□ 0.7
CTNND1O60716 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.45■□□□□ 0.7
CTNND1O60716 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.45■□□□□ 0.7
CTNND1O60716 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms