Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGA12O60330 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGA12O60330 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 REXO1L11P-201ENST00000620964 1927 ntBASIC16.64■□□□□ 0.25
PCDHGA12O60330 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 TUBB3P1-201ENST00000405796 1332 ntBASIC16.64■□□□□ 0.25
PCDHGA12O60330 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA12O60330 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA12O60330 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 FAM58DP-201ENST00000428076 619 ntBASIC16.63■□□□□ 0.25
PCDHGA12O60330 KLF2P3-201ENST00000451977 1087 ntBASIC16.63■□□□□ 0.25
PCDHGA12O60330 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 LINC01451-201ENST00000623792 534 ntBASIC16.63■□□□□ 0.25
PCDHGA12O60330 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
PCDHGA12O60330 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA12O60330 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 GPS2P2-201ENST00000430745 888 ntBASIC16.62■□□□□ 0.25
PCDHGA12O60330 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 KRT8P23-201ENST00000560090 1207 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms