Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
ACTN4O43707 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ACTN4O43707 EMBP1-201ENST00000458200 901 ntBASIC18.81■□□□□ 0.6
ACTN4O43707 AC136632.2-201ENST00000512891 861 ntBASIC18.81■□□□□ 0.6
ACTN4O43707 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.81■□□□□ 0.6
ACTN4O43707 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.81■□□□□ 0.6
ACTN4O43707 AC012640.2-201ENST00000561606 901 ntBASIC18.81■□□□□ 0.6
ACTN4O43707 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.81■□□□□ 0.6
ACTN4O43707 CYP2A7P1-201ENST00000595391 815 ntBASIC18.81■□□□□ 0.6
ACTN4O43707 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.81■□□□□ 0.6
ACTN4O43707 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
ACTN4O43707 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.81■□□□□ 0.6
ACTN4O43707 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.8■□□□□ 0.6
ACTN4O43707 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
ACTN4O43707 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.8■□□□□ 0.6
ACTN4O43707 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.8■□□□□ 0.6
ACTN4O43707 AC008667.4-201ENST00000607370 168 ntBASIC18.8■□□□□ 0.6
ACTN4O43707 AC008735.5-201ENST00000623544 497 ntBASIC18.8■□□□□ 0.6
ACTN4O43707 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
ACTN4O43707 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACTN4O43707 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ACTN4O43707 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.79■□□□□ 0.6
ACTN4O43707 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 AL353732.1-201ENST00000569618 1459 ntBASIC18.79■□□□□ 0.6
ACTN4O43707 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTN4O43707 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ACTN4O43707 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTN4O43707 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTN4O43707 AC073648.2-201ENST00000510116 352 ntBASIC18.79■□□□□ 0.6
ACTN4O43707 IGHV3-65-201ENST00000523210 341 ntBASIC18.79■□□□□ 0.6
ACTN4O43707 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTN4O43707 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.79■□□□□ 0.6
ACTN4O43707 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTN4O43707 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN4O43707 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN4O43707 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.78■□□□□ 0.6
ACTN4O43707 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 AP002414.3-201ENST00000589352 1468 ntBASIC18.78■□□□□ 0.6
ACTN4O43707 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTN4O43707 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTN4O43707 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN4O43707 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN4O43707 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ACTN4O43707 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ACTN4O43707 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms