Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LDB2O43679 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB2O43679 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 ME2P1-201ENST00000426028 1970 ntBASIC16.75■□□□□ 0.27
LDB2O43679 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB2O43679 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LDB2O43679 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.74■□□□□ 0.27
LDB2O43679 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.74■□□□□ 0.27
LDB2O43679 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.74■□□□□ 0.27
LDB2O43679 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
LDB2O43679 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 AC005052.1-201ENST00000625181 2492 ntBASIC16.74■□□□□ 0.27
LDB2O43679 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
LDB2O43679 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB2O43679 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LDB2O43679 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 AL662844.4-201ENST00000606367 2838 ntBASIC16.73■□□□□ 0.27
LDB2O43679 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.73■□□□□ 0.27
LDB2O43679 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 KRT18P2-201ENST00000447938 1258 ntBASIC16.73■□□□□ 0.27
LDB2O43679 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.73■□□□□ 0.27
LDB2O43679 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.73■□□□□ 0.27
LDB2O43679 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.73■□□□□ 0.27
LDB2O43679 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 AC064836.3-201ENST00000607928 673 ntBASIC16.73■□□□□ 0.27
LDB2O43679 AL645728.2-201ENST00000641974 660 ntBASIC16.73■□□□□ 0.27
LDB2O43679 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 AC079328.2-201ENST00000561241 3354 ntBASIC16.73■□□□□ 0.27
LDB2O43679 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB2O43679 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB2O43679 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LDB2O43679 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms