Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
FOXN1O15353 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.97■□□□□ 0.79
FOXN1O15353 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
FOXN1O15353 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FOXN1O15353 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.96■□□□□ 0.79
FOXN1O15353 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FOXN1O15353 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FOXN1O15353 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.96■□□□□ 0.79
FOXN1O15353 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN1O15353 ALG1L8P-201ENST00000533887 760 ntBASIC19.96■□□□□ 0.79
FOXN1O15353 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.96■□□□□ 0.79
FOXN1O15353 AL512343.1-201ENST00000605837 169 ntBASIC19.96■□□□□ 0.79
FOXN1O15353 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FOXN1O15353 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN1O15353 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
FOXN1O15353 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
FOXN1O15353 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN1O15353 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
FOXN1O15353 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.95■□□□□ 0.78
FOXN1O15353 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.95■□□□□ 0.78
FOXN1O15353 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.95■□□□□ 0.78
FOXN1O15353 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 AC099568.2-201ENST00000609194 695 ntBASIC19.95■□□□□ 0.78
FOXN1O15353 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
FOXN1O15353 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN1O15353 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXN1O15353 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
FOXN1O15353 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXN1O15353 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXN1O15353 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
FOXN1O15353 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.94■□□□□ 0.78
FOXN1O15353 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
FOXN1O15353 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXN1O15353 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.94■□□□□ 0.78
FOXN1O15353 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms