Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AL390955.2-201ENST00000603032 514 ntBASIC16.75■□□□□ 0.27
MID1O15344 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.75■□□□□ 0.27
MID1O15344 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 AC008677.1-201ENST00000519230 1561 ntBASIC16.75■□□□□ 0.27
MID1O15344 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MID1O15344 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.75■□□□□ 0.27
MID1O15344 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 MIR346-201ENST00000362234 95 ntBASIC16.74■□□□□ 0.27
MID1O15344 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.74■□□□□ 0.27
MID1O15344 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 AC125807.1-201ENST00000483097 614 ntBASIC16.74■□□□□ 0.27
MID1O15344 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 ALG1L8P-201ENST00000533887 760 ntBASIC16.74■□□□□ 0.27
MID1O15344 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.74■□□□□ 0.27
MID1O15344 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.74■□□□□ 0.27
MID1O15344 AL096865.1-201ENST00000606796 927 ntBASIC16.74■□□□□ 0.27
MID1O15344 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.74■□□□□ 0.27
MID1O15344 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.74■□□□□ 0.27
MID1O15344 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.74■□□□□ 0.27
MID1O15344 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
MID1O15344 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.74■□□□□ 0.27
MID1O15344 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
MID1O15344 AL671710.1-201ENST00000610245 2349 ntBASIC16.74■□□□□ 0.27
MID1O15344 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 AL023806.1-201ENST00000603994 1649 ntBASIC16.74■□□□□ 0.27
MID1O15344 AC006277.1-201ENST00000624348 1610 ntBASIC16.74■□□□□ 0.27
MID1O15344 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MID1O15344 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.73■□□□□ 0.27
MID1O15344 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.73■□□□□ 0.27
MID1O15344 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.73■□□□□ 0.27
MID1O15344 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
MID1O15344 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.73■□□□□ 0.27
MID1O15344 KLF2P3-201ENST00000451977 1087 ntBASIC16.73■□□□□ 0.27
MID1O15344 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.73■□□□□ 0.27
MID1O15344 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.73■□□□□ 0.27
MID1O15344 KRT18P34-201ENST00000488218 1270 ntBASIC16.73■□□□□ 0.27
MID1O15344 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.73■□□□□ 0.27
MID1O15344 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.73■□□□□ 0.27
MID1O15344 MIR6080-201ENST00000617359 66 ntBASIC16.73■□□□□ 0.27
MID1O15344 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.73■□□□□ 0.27
MID1O15344 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
MID1O15344 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MID1O15344 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.73■□□□□ 0.27
MID1O15344 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.73■□□□□ 0.27
MID1O15344 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MID1O15344 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.73■□□□□ 0.27
MID1O15344 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
MID1O15344 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms