Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.81■□□□□ 0.12
SPTBN2O15020 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SPTBN2O15020 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.81■□□□□ 0.12
SPTBN2O15020 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.81■□□□□ 0.12
SPTBN2O15020 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.81■□□□□ 0.12
SPTBN2O15020 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 RN7SL769P-201ENST00000469386 295 ntBASIC15.81■□□□□ 0.12
SPTBN2O15020 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.81■□□□□ 0.12
SPTBN2O15020 PRYP6-201ENST00000514804 343 ntBASIC15.81■□□□□ 0.12
SPTBN2O15020 SDHAP3-202ENST00000515467 728 ntBASIC15.81■□□□□ 0.12
SPTBN2O15020 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.81■□□□□ 0.12
SPTBN2O15020 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.81■□□□□ 0.12
SPTBN2O15020 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.81■□□□□ 0.12
SPTBN2O15020 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SPTBN2O15020 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.81■□□□□ 0.12
SPTBN2O15020 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.81■□□□□ 0.12
SPTBN2O15020 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPTBN2O15020 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.81■□□□□ 0.12
SPTBN2O15020 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SPTBN2O15020 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SPTBN2O15020 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.8■□□□□ 0.12
SPTBN2O15020 AP000812.2-201ENST00000538934 718 ntBASIC15.8■□□□□ 0.12
SPTBN2O15020 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.8■□□□□ 0.12
SPTBN2O15020 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.8■□□□□ 0.12
SPTBN2O15020 RN7SL828P-201ENST00000607615 303 ntBASIC15.8■□□□□ 0.12
SPTBN2O15020 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SPTBN2O15020 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SPTBN2O15020 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.8■□□□□ 0.12
SPTBN2O15020 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 YBX1P6-201ENST00000442962 1002 ntBASIC15.8■□□□□ 0.12
SPTBN2O15020 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.8■□□□□ 0.12
SPTBN2O15020 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 AC010328.2-201ENST00000597698 1111 ntBASIC15.8■□□□□ 0.12
SPTBN2O15020 AC138627.1-207ENST00000641560 1006 ntBASIC15.8■□□□□ 0.12
SPTBN2O15020 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.8■□□□□ 0.12
SPTBN2O15020 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.8■□□□□ 0.12
SPTBN2O15020 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPTBN2O15020 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.79■□□□□ 0.12
SPTBN2O15020 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SPTBN2O15020 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.79■□□□□ 0.12
SPTBN2O15020 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.79■□□□□ 0.12
SPTBN2O15020 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.79■□□□□ 0.12
SPTBN2O15020 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.79■□□□□ 0.12
SPTBN2O15020 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.79■□□□□ 0.12
SPTBN2O15020 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.79■□□□□ 0.12
SPTBN2O15020 SERBP1P3-201ENST00000459980 809 ntBASIC15.79■□□□□ 0.12
SPTBN2O15020 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPTBN2O15020 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.79■□□□□ 0.12
SPTBN2O15020 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.79■□□□□ 0.12
SPTBN2O15020 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms