Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.33□□□□□ -0.12
SDCBPO00560 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.33□□□□□ -0.12
SDCBPO00560 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.33□□□□□ -0.12
SDCBPO00560 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.33□□□□□ -0.12
SDCBPO00560 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.33□□□□□ -0.12
SDCBPO00560 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 BNIP3P18-201ENST00000593976 575 ntBASIC14.33□□□□□ -0.12
SDCBPO00560 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 AC092329.2-201ENST00000598402 547 ntBASIC14.33□□□□□ -0.12
SDCBPO00560 AC092119.3-201ENST00000612618 583 ntBASIC14.33□□□□□ -0.12
SDCBPO00560 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.33□□□□□ -0.12
SDCBPO00560 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SDCBPO00560 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.33□□□□□ -0.12
SDCBPO00560 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.32□□□□□ -0.12
SDCBPO00560 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 AC009336.1-201ENST00000608941 1553 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 AC105917.1-201ENST00000506637 2539 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SDCBPO00560 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SDCBPO00560 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.32□□□□□ -0.12
SDCBPO00560 IGHV3-47-201ENST00000425060 335 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.32□□□□□ -0.12
SDCBPO00560 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.32□□□□□ -0.12
SDCBPO00560 AC012615.1-201ENST00000565797 1299 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.32□□□□□ -0.12
SDCBPO00560 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.32□□□□□ -0.12
SDCBPO00560 MIR3180-1-201ENST00000580374 94 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 MIR3180-3-201ENST00000584616 94 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 AC114341.1-201ENST00000618070 349 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 AC073592.5-201ENST00000624854 528 ntBASIC14.32□□□□□ -0.12
SDCBPO00560 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.32□□□□□ -0.12
SDCBPO00560 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SDCBPO00560 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SDCBPO00560 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDCBPO00560 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms