Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf47A7E2U8 AC012317.2-201ENST00000623305 2251 ntBASIC16.34■□□□□ 0.21
C4orf47A7E2U8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
C4orf47A7E2U8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf47A7E2U8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf47A7E2U8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf47A7E2U8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf47A7E2U8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.33■□□□□ 0.21
C4orf47A7E2U8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
C4orf47A7E2U8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
C4orf47A7E2U8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
C4orf47A7E2U8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
C4orf47A7E2U8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 AC092658.1-201ENST00000505836 891 ntBASIC16.33■□□□□ 0.2
C4orf47A7E2U8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 AC004840.1-201ENST00000636359 365 ntBASIC16.33■□□□□ 0.2
C4orf47A7E2U8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf47A7E2U8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AC087499.6-201ENST00000411576 835 ntBASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 DFFBP1-201ENST00000433250 979 ntBASIC16.32■□□□□ 0.2
C4orf47A7E2U8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 MTND6P24-201ENST00000440466 518 ntBASIC16.32■□□□□ 0.2
C4orf47A7E2U8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AL035456.1-201ENST00000456064 1369 ntBASIC16.32■□□□□ 0.2
C4orf47A7E2U8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AL589739.1-201ENST00000607720 493 ntBASIC16.32■□□□□ 0.2
C4orf47A7E2U8 AL844908.2-201ENST00000609461 460 ntBASIC16.32■□□□□ 0.2
C4orf47A7E2U8 CETN4P-206ENST00000642099 2168 ntBASIC16.32■□□□□ 0.2
C4orf47A7E2U8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf47A7E2U8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms