Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 TIMM17BP1-201ENST00000545713 516 ntBASIC20.78■□□□□ 0.92
RGPD3A6NKT7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 AC016396.2-201ENST00000562575 1417 ntBASIC20.78■□□□□ 0.92
RGPD3A6NKT7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RGPD3A6NKT7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 AC253536.4-201ENST00000440539 267 ntBASIC20.77■□□□□ 0.92
RGPD3A6NKT7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RGPD3A6NKT7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 AC016694.1-201ENST00000434179 700 ntBASIC20.77■□□□□ 0.91
RGPD3A6NKT7 RPS2P36-201ENST00000456516 831 ntBASIC20.77■□□□□ 0.91
RGPD3A6NKT7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 TMEM198B-204ENST00000484016 896 ntBASIC20.77■□□□□ 0.91
RGPD3A6NKT7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 AC008687.7-202ENST00000637404 953 ntBASIC20.77■□□□□ 0.91
RGPD3A6NKT7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 KRT8P39-201ENST00000396270 1433 ntBASIC20.77■□□□□ 0.91
RGPD3A6NKT7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RGPD3A6NKT7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 AL671710.1-201ENST00000610245 2349 ntBASIC20.76■□□□□ 0.91
RGPD3A6NKT7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 FO393414.2-201ENST00000405153 598 ntBASIC20.76■□□□□ 0.91
RGPD3A6NKT7 CNN2P8-201ENST00000421872 913 ntBASIC20.76■□□□□ 0.91
RGPD3A6NKT7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 AL359711.2-201ENST00000563105 872 ntBASIC20.76■□□□□ 0.91
RGPD3A6NKT7 AC120045.2-201ENST00000567334 178 ntBASIC20.76■□□□□ 0.91
RGPD3A6NKT7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
RGPD3A6NKT7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.75■□□□□ 0.91
RGPD3A6NKT7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms