Protein–RNA interactions for Protein: A6NFT4

CFAP73, Cilia- and flagella-associated protein 73, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP73A6NFT4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.62■□□□□ 0.25
CFAP73A6NFT4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 AC002558.1-201ENST00000488906 803 ntBASIC16.62■□□□□ 0.25
CFAP73A6NFT4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.62■□□□□ 0.25
CFAP73A6NFT4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 TERF1P1-201ENST00000311003 1181 ntBASIC16.61■□□□□ 0.25
CFAP73A6NFT4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 KRT18P65-201ENST00000439811 1286 ntBASIC16.61■□□□□ 0.25
CFAP73A6NFT4 BX664615.1-201ENST00000443558 458 ntBASIC16.61■□□□□ 0.25
CFAP73A6NFT4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.61■□□□□ 0.25
CFAP73A6NFT4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP73A6NFT4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.6■□□□□ 0.25
CFAP73A6NFT4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.6■□□□□ 0.25
CFAP73A6NFT4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 RASA4DP-201ENST00000460726 1199 ntBASIC16.6■□□□□ 0.25
CFAP73A6NFT4 HLA-J-202ENST00000469281 1241 ntBASIC16.6■□□□□ 0.25
CFAP73A6NFT4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.6■□□□□ 0.25
CFAP73A6NFT4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms