Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 DNAJB3-201ENST00000446806 729 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC010327.4-202ENST00000591484 748 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ACTL9-202ENST00000612068 1252 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AL139011.1-202ENST00000642063 584 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SLC22A20-204ENST00000530038 1673 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC009053.2-201ENST00000563701 2365 ntBASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 IGLL3P-201ENST00000412472 434 ntBASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AP001350.2-201ENST00000625104 1094 ntBASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AGGF1P2-201ENST00000426656 2106 ntBASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC087641.1-201ENST00000557561 1021 ntBASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC096734.2-201ENST00000562054 433 ntBASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC055717.3-201ENST00000622967 595 ntBASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms