Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 RNF216P1-203ENST00000404404 2427 ntBASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 PCDHB17P-201ENST00000539533 2393 ntBASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 PCDHA14-201ENST00000506751 2298 ntBASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 AC006557.2-201ENST00000592985 1240 ntBASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 AL161772.1-201ENST00000610494 4412 ntBASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 FLJ38576-201ENST00000623820 2459 ntBASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 LAGE3P1-201ENST00000425356 484 ntBASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 AGGF1P2-201ENST00000426656 2106 ntBASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 AC021087.4-201ENST00000563761 564 ntBASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV1A0A0A0MS02 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms