Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 AL118508.1-201ENST00000613502 2345 ntBASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 PCDHA14-201ENST00000506751 2298 ntBASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 HTR5BP-201ENST00000430851 1154 ntBASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 AC004967.1-201ENST00000453589 447 ntBASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 YBX1P5-201ENST00000509441 847 ntBASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 AC134684.3-201ENST00000641758 218 ntBASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL4A3BPQ9Y5P4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 LINC00895-201ENST00000629028 1637 ntBASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 AC211486.1-202ENST00000416371 468 ntBASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 MKNK2P1-201ENST00000437526 628 ntBASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 AC211476.1-201ENST00000503899 468 ntBASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 AC068137.2-201ENST00000605408 478 ntBASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 AL645728.1-201ENST00000366221 2101 ntBASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL4A3BPQ9Y5P4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms