Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 SRD5A3P1-201ENST00000603021 949 ntBASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 TTTY23B-201ENST00000442790 549 ntBASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCBQ9Y3I0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 MYCLP2-201ENST00000449268 967 ntBASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 AC006277.1-201ENST00000624348 1610 ntBASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
RTCBQ9Y3I0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 TUBB8P12-201ENST00000308911 1335 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 MEP1AP4-201ENST00000423244 1087 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 TUBB7P-202ENST00000428444 1305 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 TPRX2P-201ENST00000535362 881 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 TUBB8P7-204ENST00000567960 1332 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 AC013467.2-201ENST00000605472 835 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 AL033527.5-202ENST00000641632 1098 ntBASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms