Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 STK25P1-201ENST00000585406 838 ntBASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AL603832.2-201ENST00000566195 2125 ntBASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 TSPY7P-201ENST00000431358 1114 ntBASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AL158047.1-201ENST00000445918 881 ntBASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AP003733.1-201ENST00000491725 852 ntBASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AC010947.1-201ENST00000623454 693 ntBASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RCL1Q9Y2P8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms