Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
STAG3Q9UJ98 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC23.91■■□□□ 1.42
STAG3Q9UJ98 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC23.91■■□□□ 1.42
STAG3Q9UJ98 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
STAG3Q9UJ98 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 RASL12-203ENST00000434605 982 ntTSL 2 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 CD81-207ENST00000481687 890 ntTSL 2 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 ZNF890P-202ENST00000530367 1156 ntBASIC23.9■■□□□ 1.42
STAG3Q9UJ98 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 BICD1-207ENST00000551848 1962 ntBASIC23.9■■□□□ 1.42
STAG3Q9UJ98 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
STAG3Q9UJ98 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
STAG3Q9UJ98 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
STAG3Q9UJ98 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
STAG3Q9UJ98 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
STAG3Q9UJ98 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
STAG3Q9UJ98 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
STAG3Q9UJ98 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC23.89■■□□□ 1.42
STAG3Q9UJ98 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
STAG3Q9UJ98 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 OR6D1P-202ENST00000641007 5290 ntBASIC23.88■■□□□ 1.41
STAG3Q9UJ98 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 AC044860.1-202ENST00000559481 777 ntBASIC23.88■■□□□ 1.41
STAG3Q9UJ98 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 AL023806.1-201ENST00000603994 1649 ntBASIC23.88■■□□□ 1.41
STAG3Q9UJ98 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG3Q9UJ98 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AC087289.5-201ENST00000586076 3175 ntBASIC23.87■■□□□ 1.41
STAG3Q9UJ98 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AL512361.1-201ENST00000554200 418 ntBASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AC106886.1-201ENST00000568660 600 ntBASIC23.87■■□□□ 1.41
STAG3Q9UJ98 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AC004790.1-201ENST00000612686 536 ntBASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG3Q9UJ98 AC108860.2-201ENST00000562760 2183 ntBASIC23.86■■□□□ 1.41
STAG3Q9UJ98 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG3Q9UJ98 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG3Q9UJ98 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms