Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 TSEN15P1-201ENST00000423257 515 ntBASIC15.78■□□□□ 0.12
CTSFQ9UBX1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 AC079140.1-201ENST00000508039 487 ntBASIC15.78■□□□□ 0.12
CTSFQ9UBX1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CTSFQ9UBX1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 AL139400.1-201ENST00000366220 510 ntBASIC15.77■□□□□ 0.12
CTSFQ9UBX1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 AC093520.2-201ENST00000561830 333 ntBASIC15.77■□□□□ 0.12
CTSFQ9UBX1 AC093028.1-201ENST00000622998 982 ntBASIC15.77■□□□□ 0.12
CTSFQ9UBX1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CTSFQ9UBX1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 PCDHB17P-201ENST00000539533 2393 ntBASIC15.77■□□□□ 0.11
CTSFQ9UBX1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.77■□□□□ 0.11
CTSFQ9UBX1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTSFQ9UBX1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 AL627223.1-201ENST00000416693 442 ntBASIC15.76■□□□□ 0.11
CTSFQ9UBX1 AC092474.2-201ENST00000424288 719 ntBASIC15.76■□□□□ 0.11
CTSFQ9UBX1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 AC023141.5-201ENST00000458585 616 ntBASIC15.76■□□□□ 0.11
CTSFQ9UBX1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 AC243562.1-201ENST00000560672 389 ntBASIC15.76■□□□□ 0.11
CTSFQ9UBX1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
CTSFQ9UBX1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms