Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 AC092337.1-201ENST00000568699 1129 ntBASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 CTBP2P3-201ENST00000585629 1255 ntBASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 AC020765.3-201ENST00000613051 740 ntBASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC52A1Q9NWF4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 MIR658-201ENST00000385210 100 ntBASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 TTTY23B-201ENST00000442790 549 ntBASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 MIR6069-201ENST00000620069 79 ntBASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC52A1Q9NWF4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 NOC2LP1-202ENST00000452600 2235 ntBASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC52A1Q9NWF4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms