Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM248Q9NWD8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM248Q9NWD8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM248Q9NWD8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM248Q9NWD8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 RPSAP43-201ENST00000402237 625 ntBASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 UPF3AP3-201ENST00000420996 769 ntBASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 HTR5BP-201ENST00000430851 1154 ntBASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 AC023511.2-201ENST00000618803 211 ntBASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 GGT4P-201ENST00000623672 1708 ntBASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM248Q9NWD8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 ACTG1P14-201ENST00000446382 1122 ntBASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 AC112482.1-201ENST00000492080 688 ntBASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 AC005829.1-201ENST00000570002 483 ntBASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 AC010327.4-202ENST00000591484 748 ntBASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM248Q9NWD8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM248Q9NWD8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM248Q9NWD8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.08■□□□□ 0.33
TMEM248Q9NWD8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM248Q9NWD8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM248Q9NWD8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 KRT18P13-201ENST00000400056 1290 ntBASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 YBX1P5-201ENST00000509441 847 ntBASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 MIR3687-2-201ENST00000577708 61 ntBASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
TMEM248Q9NWD8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms