Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC022188.1-201ENST00000620960 1664 ntBASIC15.69■□□□□ 0.1
RLIMQ9NVW2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 SART3-203ENST00000546611 1184 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AL355877.3-201ENST00000622820 899 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AC012313.10-201ENST00000623509 926 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AL139288.1-201ENST00000623748 933 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 AC005052.1-201ENST00000625181 2492 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 TUBB8P12-201ENST00000308911 1335 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 TUBB7P-202ENST00000428444 1305 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 TUBB8P7-204ENST00000567960 1332 ntBASIC15.68■□□□□ 0.1
RLIMQ9NVW2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.68■□□□□ 0.1
RLIMQ9NVW2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 AC243591.1-201ENST00000452967 1364 ntBASIC15.67■□□□□ 0.1
RLIMQ9NVW2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 AP002414.1-201ENST00000391405 1147 ntBASIC15.67■□□□□ 0.1
RLIMQ9NVW2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 FGFR3P6-201ENST00000457012 610 ntBASIC15.67■□□□□ 0.1
RLIMQ9NVW2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 AC008608.2-201ENST00000606089 416 ntBASIC15.67■□□□□ 0.1
RLIMQ9NVW2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 NCF1C-201ENST00000438382 1427 ntBASIC15.67■□□□□ 0.1
RLIMQ9NVW2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.67■□□□□ 0.1
RLIMQ9NVW2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms