Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1AQ9HD42 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 AC122714.2-201ENST00000502787 707 ntBASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 AC105917.1-201ENST00000506637 2539 ntBASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1AQ9HD42 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 AC125634.1-201ENST00000438758 1403 ntBASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 SLC25A1P3-201ENST00000395415 828 ntBASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 VENTXP7-201ENST00000475503 772 ntBASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 STK19B-204ENST00000512515 211 ntBASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 AC090616.6-201ENST00000582640 721 ntBASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP1AQ9HD42 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1AQ9HD42 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.52□□□□□ -0.08
CHMP1AQ9HD42 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1AQ9HD42 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms